Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.98□□□□□ -0.01
APOBEC1P41238 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.98□□□□□ -0.01
APOBEC1P41238 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 AC092919.2-201ENST00000623631 1645 ntBASIC14.98□□□□□ -0.01
APOBEC1P41238 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOBEC1P41238 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOBEC1P41238 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.97□□□□□ -0.01
APOBEC1P41238 AC004832.2-201ENST00000426397 482 ntBASIC14.97□□□□□ -0.01
APOBEC1P41238 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.97□□□□□ -0.01
APOBEC1P41238 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.97□□□□□ -0.01
APOBEC1P41238 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.97□□□□□ -0.01
APOBEC1P41238 MTDHP5-201ENST00000598980 586 ntBASIC14.97□□□□□ -0.01
APOBEC1P41238 AL078644.1-201ENST00000609881 752 ntBASIC14.97□□□□□ -0.01
APOBEC1P41238 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
APOBEC1P41238 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 WASH6P-202ENST00000359512 1437 ntBASIC14.97□□□□□ -0.01
APOBEC1P41238 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
APOBEC1P41238 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.97□□□□□ -0.01
APOBEC1P41238 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
APOBEC1P41238 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.96□□□□□ -0.01
APOBEC1P41238 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
APOBEC1P41238 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.96□□□□□ -0.01
APOBEC1P41238 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.96□□□□□ -0.01
APOBEC1P41238 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
APOBEC1P41238 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
APOBEC1P41238 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.96□□□□□ -0.01
APOBEC1P41238 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
APOBEC1P41238 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.96□□□□□ -0.01
APOBEC1P41238 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.96□□□□□ -0.01
APOBEC1P41238 AL671883.3-201ENST00000603274 991 ntBASIC14.96□□□□□ -0.01
APOBEC1P41238 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
APOBEC1P41238 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
APOBEC1P41238 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOBEC1P41238 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.96□□□□□ -0.02
APOBEC1P41238 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
APOBEC1P41238 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOBEC1P41238 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.96□□□□□ -0.02
APOBEC1P41238 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
APOBEC1P41238 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOBEC1P41238 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
APOBEC1P41238 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
APOBEC1P41238 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.95□□□□□ -0.02
APOBEC1P41238 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBEC1P41238 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
APOBEC1P41238 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms