Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC079781.5-202ENST00000641784 3743 ntBASIC18.9■□□□□ 0.62
CLCN1P35523 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN1P35523 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN1P35523 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCN1P35523 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.89■□□□□ 0.62
CLCN1P35523 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CLCN1P35523 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCN1P35523 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCN1P35523 AC005252.3-201ENST00000623855 2258 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 COX5BP2-201ENST00000392354 334 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 AC007967.3-201ENST00000434308 558 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 BX276092.5-203ENST00000456199 560 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 AC091607.1-201ENST00000490318 1060 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.89■□□□□ 0.61
CLCN1P35523 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCN1P35523 AC087388.1-201ENST00000571370 1112 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLCN1P35523 AL138831.2-201ENST00000606564 490 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 AL121672.3-201ENST00000608644 468 ntBASIC18.89■□□□□ 0.61
CLCN1P35523 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN1P35523 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN1P35523 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCN1P35523 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CLCN1P35523 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN1P35523 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN1P35523 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN1P35523 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.88■□□□□ 0.61
CLCN1P35523 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN1P35523 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLCN1P35523 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.88■□□□□ 0.61
CLCN1P35523 CHCHD2P8-201ENST00000429873 447 ntBASIC18.88■□□□□ 0.61
CLCN1P35523 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN1P35523 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN1P35523 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CLCN1P35523 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN1P35523 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 AC244517.3-201ENST00000616254 1235 ntBASIC18.88■□□□□ 0.61
CLCN1P35523 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLCN1P35523 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN1P35523 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN1P35523 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.87■□□□□ 0.61
CLCN1P35523 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN1P35523 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN1P35523 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLCN1P35523 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLCN1P35523 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms