Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 ARMC10P1-201ENST00000313754 855 ntBASIC17.55■□□□□ 0.4
CTNNA1P35221 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 PTCHD3P3-201ENST00000403073 906 ntBASIC17.55■□□□□ 0.4
CTNNA1P35221 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTNNA1P35221 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.55■□□□□ 0.4
CTNNA1P35221 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.55■□□□□ 0.4
CTNNA1P35221 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 AC091167.2-201ENST00000579581 588 ntBASIC17.55■□□□□ 0.4
CTNNA1P35221 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.55■□□□□ 0.4
CTNNA1P35221 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.55■□□□□ 0.4
CTNNA1P35221 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTNNA1P35221 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNNA1P35221 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CTNNA1P35221 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNNA1P35221 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNNA1P35221 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTNNA1P35221 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.54■□□□□ 0.4
CTNNA1P35221 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.54■□□□□ 0.4
CTNNA1P35221 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.54■□□□□ 0.4
CTNNA1P35221 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNNA1P35221 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNNA1P35221 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.54■□□□□ 0.4
CTNNA1P35221 AC008608.2-201ENST00000606089 416 ntBASIC17.54■□□□□ 0.4
CTNNA1P35221 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CTNNA1P35221 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNNA1P35221 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTNNA1P35221 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNNA1P35221 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTNNA1P35221 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNNA1P35221 AC092850.2-201ENST00000623821 2697 ntBASIC17.54■□□□□ 0.4
CTNNA1P35221 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 AC131009.4-201ENST00000624048 1740 ntBASIC17.53■□□□□ 0.4
CTNNA1P35221 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNNA1P35221 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNNA1P35221 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNNA1P35221 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CTNNA1P35221 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.53■□□□□ 0.4
CTNNA1P35221 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 TSPY19P-201ENST00000418461 509 ntBASIC17.53■□□□□ 0.4
CTNNA1P35221 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
CTNNA1P35221 TSPY18P-201ENST00000441642 509 ntBASIC17.53■□□□□ 0.4
CTNNA1P35221 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 SLC25A6P2-201ENST00000497974 877 ntBASIC17.53■□□□□ 0.4
CTNNA1P35221 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.53■□□□□ 0.4
CTNNA1P35221 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTNNA1P35221 MIR3652-201ENST00000579335 131 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms