Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-FP30511 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HLA-FP30511 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
HLA-FP30511 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-FP30511 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-FP30511 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-FP30511 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.74■□□□□ 0.27
HLA-FP30511 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 BANF1P1-201ENST00000553684 263 ntBASIC16.74■□□□□ 0.27
HLA-FP30511 MIR4745-201ENST00000577608 62 ntBASIC16.74■□□□□ 0.27
HLA-FP30511 SPDYE12P-201ENST00000618416 771 ntBASIC16.74■□□□□ 0.27
HLA-FP30511 AC073592.8-201ENST00000624126 511 ntBASIC16.74■□□□□ 0.27
HLA-FP30511 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 AC106886.4-201ENST00000623557 2502 ntBASIC16.74■□□□□ 0.27
HLA-FP30511 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 GGT3P-204ENST00000453783 1664 ntBASIC16.74■□□□□ 0.27
HLA-FP30511 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-FP30511 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-FP30511 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-FP30511 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-FP30511 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.74■□□□□ 0.27
HLA-FP30511 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-FP30511 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-FP30511 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-FP30511 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-FP30511 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 UGT1A2P-201ENST00000454886 866 ntBASIC16.73■□□□□ 0.27
HLA-FP30511 AC027369.6-201ENST00000525520 931 ntBASIC16.73■□□□□ 0.27
HLA-FP30511 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-FP30511 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-FP30511 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HLA-FP30511 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-FP30511 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-FP30511 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-FP30511 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-FP30511 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.72■□□□□ 0.27
HLA-FP30511 AC100757.3-201ENST00000622361 1406 ntBASIC16.72■□□□□ 0.27
HLA-FP30511 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
HLA-FP30511 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HLA-FP30511 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HLA-FP30511 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.72■□□□□ 0.27
HLA-FP30511 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.72■□□□□ 0.27
HLA-FP30511 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 AL138828.2-201ENST00000615812 383 ntBASIC16.72■□□□□ 0.27
HLA-FP30511 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.72■□□□□ 0.27
HLA-FP30511 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 AL035456.1-201ENST00000456064 1369 ntBASIC16.72■□□□□ 0.27
HLA-FP30511 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-FP30511 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.71■□□□□ 0.27
HLA-FP30511 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-FP30511 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-FP30511 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms