Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.29■■□□□ 1
RXRBP28702 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC21.29■■□□□ 1
RXRBP28702 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RXRBP28702 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.29■■□□□ 1
RXRBP28702 RPL13P2-201ENST00000440687 659 ntBASIC21.29■■□□□ 1
RXRBP28702 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC21.29■■□□□ 1
RXRBP28702 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.29■■□□□ 1
RXRBP28702 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.29■■□□□ 1
RXRBP28702 RN7SL736P-201ENST00000613111 269 ntBASIC21.29■■□□□ 1
RXRBP28702 AP000346.4-201ENST00000614827 381 ntBASIC21.29■■□□□ 1
RXRBP28702 AL671710.1-201ENST00000610245 2349 ntBASIC21.29■■□□□ 1
RXRBP28702 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RXRBP28702 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.29■■□□□ 1
RXRBP28702 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
RXRBP28702 RNF165-205ENST00000588679 2904 ntBASIC21.28■■□□□ 1
RXRBP28702 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 LINC00304-203ENST00000565008 1864 ntBASIC21.28■■□□□ 1
RXRBP28702 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 BRF1-202ENST00000379932 884 ntTSL 5 BASIC21.28■■□□□ 1
RXRBP28702 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RXRBP28702 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC21.28■■□□□ 1
RXRBP28702 Z97180.1-201ENST00000445173 988 ntBASIC21.28■■□□□ 1
RXRBP28702 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC21.28■■□□□ 1
RXRBP28702 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.28■■□□□ 1
RXRBP28702 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 INO80C-210ENST00000590757 595 ntTSL 2 BASIC21.28■■□□□ 1
RXRBP28702 AC138649.2-201ENST00000615886 705 ntBASIC21.28■■□□□ 1
RXRBP28702 AC011491.1-203ENST00000637688 543 ntBASIC21.28■■□□□ 1
RXRBP28702 AC108860.2-201ENST00000562760 2183 ntBASIC21.28■■□□□ 1
RXRBP28702 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RXRBP28702 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RXRBP28702 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RXRBP28702 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RXRBP28702 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RXRBP28702 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.27■■□□□ 1
RXRBP28702 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
RXRBP28702 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.27■■□□□ 1
RXRBP28702 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RXRBP28702 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC21.27■■□□□ 1
RXRBP28702 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.27■■□□□ 1
RXRBP28702 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC21.27■■□□□ 1
RXRBP28702 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC21.27■■□□□ 1
RXRBP28702 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 CYGB-203ENST00000589145 788 ntTSL 3 BASIC21.27■■□□□ 1
RXRBP28702 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC21.27■■□□□ 1
RXRBP28702 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RXRBP28702 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RXRBP28702 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RXRBP28702 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.27■■□□□ 1
RXRBP28702 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RXRBP28702 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC21.27■□□□□ 0.99
RXRBP28702 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
RXRBP28702 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RXRBP28702 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.26■□□□□ 0.99
RXRBP28702 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RXRBP28702 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RXRBP28702 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RXRBP28702 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RXRBP28702 MIR1227-201ENST00000408484 88 ntBASIC21.26■□□□□ 0.99
RXRBP28702 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.26■□□□□ 0.99
RXRBP28702 AC022137.2-201ENST00000503482 481 ntBASIC21.26■□□□□ 0.99
RXRBP28702 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC21.26■□□□□ 0.99
RXRBP28702 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RXRBP28702 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.25■□□□□ 0.99
RXRBP28702 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.25■□□□□ 0.99
RXRBP28702 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.25■□□□□ 0.99
RXRBP28702 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RXRBP28702 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RXRBP28702 VDAC1P7-201ENST00000462417 847 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms