Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ABCD3P28288 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ABCD3P28288 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ABCD3P28288 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
ABCD3P28288 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ABCD3P28288 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ABCD3P28288 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ABCD3P28288 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ABCD3P28288 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.26■□□□□ 0.03
ABCD3P28288 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCD3P28288 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
ABCD3P28288 SPDYE11-202ENST00000450699 704 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 TIMM8BP1-201ENST00000452384 211 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 AC004967.1-201ENST00000453589 447 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.26■□□□□ 0.03
ABCD3P28288 SPDYE9P-201ENST00000570642 692 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCD3P28288 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCD3P28288 SPDYE10P-202ENST00000612005 668 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 SPDYE8P-202ENST00000612377 668 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.26■□□□□ 0.03
ABCD3P28288 AC134684.3-201ENST00000641758 218 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 AL162727.3-201ENST00000635661 2787 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ABCD3P28288 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCD3P28288 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
ABCD3P28288 PCDHA14-201ENST00000506751 2298 ntBASIC15.26■□□□□ 0.03
ABCD3P28288 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCD3P28288 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 PCGF3-213ENST00000620529 1899 ntBASIC15.25■□□□□ 0.03
ABCD3P28288 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.25■□□□□ 0.03
ABCD3P28288 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.25■□□□□ 0.03
ABCD3P28288 KRT8P48-201ENST00000515599 1220 ntBASIC15.25■□□□□ 0.03
ABCD3P28288 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.25■□□□□ 0.03
ABCD3P28288 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 AC139530.3-201ENST00000620344 690 ntBASIC15.25■□□□□ 0.03
ABCD3P28288 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.25■□□□□ 0.03
ABCD3P28288 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ABCD3P28288 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCD3P28288 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCD3P28288 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCD3P28288 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCD3P28288 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCD3P28288 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.24■□□□□ 0.03
ABCD3P28288 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCD3P28288 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms