Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
VARSP26640 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 AC079328.2-201ENST00000561241 3354 ntBASIC16.36■□□□□ 0.21
VARSP26640 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.36■□□□□ 0.21
VARSP26640 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 AL021920.2-201ENST00000624828 1351 ntBASIC16.36■□□□□ 0.21
VARSP26640 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VARSP26640 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 AC092910.1-201ENST00000482027 1129 ntBASIC16.35■□□□□ 0.21
VARSP26640 SLC25A6P2-201ENST00000497974 877 ntBASIC16.35■□□□□ 0.21
VARSP26640 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.35■□□□□ 0.21
VARSP26640 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VARSP26640 MIR1199-201ENST00000621445 119 ntBASIC16.35■□□□□ 0.21
VARSP26640 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.35■□□□□ 0.21
VARSP26640 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 HLA-A-202ENST00000376806 1854 ntBASIC16.35■□□□□ 0.21
VARSP26640 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
VARSP26640 KRT8P49-201ENST00000604166 1432 ntBASIC16.35■□□□□ 0.21
VARSP26640 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VARSP26640 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.34■□□□□ 0.21
VARSP26640 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 PMS2P2-201ENST00000425039 1128 ntBASIC16.34■□□□□ 0.21
VARSP26640 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.34■□□□□ 0.21
VARSP26640 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.34■□□□□ 0.21
VARSP26640 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.34■□□□□ 0.21
VARSP26640 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 AC002310.6-201ENST00000624451 1377 ntBASIC16.34■□□□□ 0.21
VARSP26640 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.34■□□□□ 0.21
VARSP26640 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VARSP26640 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VARSP26640 CYP2T1P-202ENST00000641596 2535 ntBASIC16.34■□□□□ 0.21
VARSP26640 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms