Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40P25942 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40P25942 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CD40P25942 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 GPAA1P2-202ENST00000606848 1787 ntBASIC14.25□□□□□ -0.13
CD40P25942 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CD40P25942 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40P25942 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40P25942 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.25□□□□□ -0.13
CD40P25942 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 SPTSSB-204ENST00000617024 1292 ntBASIC14.25□□□□□ -0.13
CD40P25942 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.25□□□□□ -0.13
CD40P25942 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.25□□□□□ -0.13
CD40P25942 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CD40P25942 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD40P25942 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40P25942 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CD40P25942 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CD40P25942 HLA-H-201ENST00000383620 1096 ntBASIC14.24□□□□□ -0.13
CD40P25942 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40P25942 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40P25942 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 AC098859.1-201ENST00000502915 1238 ntBASIC14.24□□□□□ -0.13
CD40P25942 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40P25942 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.24□□□□□ -0.13
CD40P25942 AC140878.1-201ENST00000565277 250 ntBASIC14.24□□□□□ -0.13
CD40P25942 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40P25942 AC005498.2-205ENST00000593218 784 ntBASIC14.24□□□□□ -0.13
CD40P25942 AC018529.1-201ENST00000613063 361 ntBASIC14.24□□□□□ -0.13
CD40P25942 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40P25942 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CD40P25942 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.24□□□□□ -0.13
CD40P25942 FOXO1B-201ENST00000504678 1527 ntBASIC14.24□□□□□ -0.13
CD40P25942 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.24□□□□□ -0.13
CD40P25942 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD40P25942 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
CD40P25942 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.23□□□□□ -0.13
CD40P25942 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms