Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LMNB1P20700 MIR1247-201ENST00000408206 136 ntBASIC19.9■□□□□ 0.78
LMNB1P20700 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
LMNB1P20700 GPAA1P2-201ENST00000417923 928 ntBASIC19.9■□□□□ 0.78
LMNB1P20700 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.9■□□□□ 0.78
LMNB1P20700 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.9■□□□□ 0.78
LMNB1P20700 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.9■□□□□ 0.78
LMNB1P20700 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.9■□□□□ 0.78
LMNB1P20700 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.9■□□□□ 0.78
LMNB1P20700 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.9■□□□□ 0.78
LMNB1P20700 AC243960.2-201ENST00000600996 747 ntBASIC19.9■□□□□ 0.78
LMNB1P20700 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LMNB1P20700 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 AC133963.1-201ENST00000504166 1679 ntBASIC19.9■□□□□ 0.78
LMNB1P20700 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LMNB1P20700 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.9■□□□□ 0.78
LMNB1P20700 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LMNB1P20700 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
LMNB1P20700 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.89■□□□□ 0.77
LMNB1P20700 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNB1P20700 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNB1P20700 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.89■□□□□ 0.77
LMNB1P20700 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNB1P20700 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNB1P20700 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LMNB1P20700 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.89■□□□□ 0.77
LMNB1P20700 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNB1P20700 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.89■□□□□ 0.77
LMNB1P20700 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.89■□□□□ 0.77
LMNB1P20700 AC018470.1-201ENST00000624790 3129 ntBASIC19.89■□□□□ 0.77
LMNB1P20700 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LMNB1P20700 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LMNB1P20700 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.89■□□□□ 0.77
LMNB1P20700 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
LMNB1P20700 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNB1P20700 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LMNB1P20700 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 NOC2LP2-201ENST00000407594 1944 ntBASIC19.88■□□□□ 0.77
LMNB1P20700 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNB1P20700 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNB1P20700 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LMNB1P20700 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNB1P20700 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LMNB1P20700 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LMNB1P20700 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNB1P20700 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.88■□□□□ 0.77
LMNB1P20700 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LMNB1P20700 AC005229.1-201ENST00000392885 409 ntBASIC19.88■□□□□ 0.77
LMNB1P20700 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 ACTG1P3-201ENST00000431775 1114 ntBASIC19.88■□□□□ 0.77
LMNB1P20700 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LMNB1P20700 AL162726.2-201ENST00000438986 1017 ntBASIC19.88■□□□□ 0.77
LMNB1P20700 AC007551.1-201ENST00000457394 519 ntBASIC19.88■□□□□ 0.77
LMNB1P20700 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNB1P20700 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNB1P20700 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.88■□□□□ 0.77
LMNB1P20700 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.88■□□□□ 0.77
LMNB1P20700 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 MIR5189-201ENST00000577370 114 ntBASIC19.88■□□□□ 0.77
LMNB1P20700 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.88■□□□□ 0.77
LMNB1P20700 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNB1P20700 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LMNB1P20700 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.88■□□□□ 0.77
LMNB1P20700 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.88■□□□□ 0.77
LMNB1P20700 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNB1P20700 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNB1P20700 AL355312.1-201ENST00000407115 2176 ntBASIC19.87■□□□□ 0.77
LMNB1P20700 KRT8P22-201ENST00000562317 1415 ntBASIC19.87■□□□□ 0.77
LMNB1P20700 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
LMNB1P20700 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
LMNB1P20700 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNB1P20700 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LMNB1P20700 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LMNB1P20700 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms