Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RAB4AP20338 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB4AP20338 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB4AP20338 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
RAB4AP20338 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
RAB4AP20338 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RAB4AP20338 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB4AP20338 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB4AP20338 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB4AP20338 AC097488.1-201ENST00000507834 756 ntBASIC12.77□□□□□ -0.37
RAB4AP20338 RNA5SP413-201ENST00000516373 109 ntBASIC12.77□□□□□ -0.37
RAB4AP20338 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB4AP20338 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB4AP20338 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB4AP20338 AC010240.3-201ENST00000607688 395 ntBASIC12.77□□□□□ -0.37
RAB4AP20338 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB4AP20338 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB4AP20338 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
RAB4AP20338 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB4AP20338 AC007292.2-201ENST00000593524 1812 ntBASIC12.76□□□□□ -0.37
RAB4AP20338 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB4AP20338 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB4AP20338 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.76□□□□□ -0.37
RAB4AP20338 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 AC106881.1-201ENST00000605849 3329 ntBASIC12.76□□□□□ -0.37
RAB4AP20338 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB4AP20338 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 AL355355.2-201ENST00000442321 338 ntBASIC12.76□□□□□ -0.37
RAB4AP20338 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB4AP20338 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
RAB4AP20338 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB4AP20338 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.76□□□□□ -0.37
RAB4AP20338 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB4AP20338 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB4AP20338 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
RAB4AP20338 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB4AP20338 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 AC078925.2-201ENST00000624013 1973 ntBASIC12.76□□□□□ -0.37
RAB4AP20338 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB4AP20338 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB4AP20338 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB4AP20338 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB4AP20338 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB4AP20338 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB4AP20338 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms