Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A2P16615 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A2P16615 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A2P16615 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A2P16615 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.31■□□□□ 0.52
ATP2A2P16615 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A2P16615 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A2P16615 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A2P16615 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A2P16615 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A2P16615 MIR346-201ENST00000362234 95 ntBASIC18.31■□□□□ 0.52
ATP2A2P16615 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A2P16615 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A2P16615 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.31■□□□□ 0.52
ATP2A2P16615 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A2P16615 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A2P16615 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 CU639417.3-201ENST00000624240 1404 ntBASIC18.31■□□□□ 0.52
ATP2A2P16615 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A2P16615 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A2P16615 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A2P16615 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 AC022144.1-201ENST00000602255 1580 ntBASIC18.3■□□□□ 0.52
ATP2A2P16615 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A2P16615 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP2A2P16615 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A2P16615 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 ARSEP1-201ENST00000420443 635 ntBASIC18.3■□□□□ 0.52
ATP2A2P16615 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A2P16615 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ATP2A2P16615 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ATP2A2P16615 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.3■□□□□ 0.52
ATP2A2P16615 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A2P16615 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP2A2P16615 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP2A2P16615 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP2A2P16615 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ATP2A2P16615 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATP2A2P16615 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ATP2A2P16615 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A2P16615 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A2P16615 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 PP12613-201ENST00000424958 2230 ntBASIC18.29■□□□□ 0.52
ATP2A2P16615 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A2P16615 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.29■□□□□ 0.52
ATP2A2P16615 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
ATP2A2P16615 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ATP2A2P16615 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ATP2A2P16615 TSSK5P-201ENST00000423978 907 ntBASIC18.29■□□□□ 0.52
ATP2A2P16615 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP2A2P16615 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP2A2P16615 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A2P16615 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.29■□□□□ 0.52
ATP2A2P16615 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP2A2P16615 AL355312.1-201ENST00000407115 2176 ntBASIC18.29■□□□□ 0.52
ATP2A2P16615 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms