Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1DP16402 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1DP16402 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1DP16402 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H1DP16402 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1DP16402 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H1DP16402 AC131009.4-201ENST00000624048 1740 ntBASIC14.1□□□□□ -0.15
HIST1H1DP16402 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 LINC02447-202ENST00000501888 2146 ntBASIC14.09□□□□□ -0.15
HIST1H1DP16402 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 BX005266.1-201ENST00000473402 457 ntBASIC14.09□□□□□ -0.15
HIST1H1DP16402 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 MIR5100-201ENST00000579544 119 ntBASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 AL139424.1-201ENST00000607572 797 ntBASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 MST1L-201ENST00000442552 2185 ntBASIC14.09□□□□□ -0.15
HIST1H1DP16402 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.09□□□□□ -0.15
HIST1H1DP16402 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H1DP16402 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H1DP16402 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.08□□□□□ -0.15
HIST1H1DP16402 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H1DP16402 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
HIST1H1DP16402 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H1DP16402 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H1DP16402 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HIST1H1DP16402 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
HIST1H1DP16402 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HIST1H1DP16402 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H1DP16402 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.08□□□□□ -0.16
HIST1H1DP16402 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H1DP16402 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.08□□□□□ -0.16
HIST1H1DP16402 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HIST1H1DP16402 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms