Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
GCFC2P16383 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.7■□□□□ 0.58
GCFC2P16383 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.7■□□□□ 0.58
GCFC2P16383 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 AC079140.1-201ENST00000508039 487 ntBASIC18.7■□□□□ 0.58
GCFC2P16383 AP000344.2-201ENST00000512987 629 ntBASIC18.7■□□□□ 0.58
GCFC2P16383 PRYP6-201ENST00000514804 343 ntBASIC18.7■□□□□ 0.58
GCFC2P16383 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.7■□□□□ 0.58
GCFC2P16383 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.7■□□□□ 0.58
GCFC2P16383 KRT8P23-201ENST00000560090 1207 ntBASIC18.7■□□□□ 0.58
GCFC2P16383 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.7■□□□□ 0.58
GCFC2P16383 AC022145.2-201ENST00000598203 171 ntBASIC18.7■□□□□ 0.58
GCFC2P16383 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GCFC2P16383 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.7■□□□□ 0.58
GCFC2P16383 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.69■□□□□ 0.58
GCFC2P16383 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.69■□□□□ 0.58
GCFC2P16383 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 AL162727.3-201ENST00000635661 2787 ntBASIC18.69■□□□□ 0.58
GCFC2P16383 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.69■□□□□ 0.58
GCFC2P16383 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.69■□□□□ 0.58
GCFC2P16383 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.69■□□□□ 0.58
GCFC2P16383 AC093724.1-201ENST00000448659 1027 ntBASIC18.69■□□□□ 0.58
GCFC2P16383 AC004967.1-201ENST00000453589 447 ntBASIC18.69■□□□□ 0.58
GCFC2P16383 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.69■□□□□ 0.58
GCFC2P16383 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.69■□□□□ 0.58
GCFC2P16383 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.69■□□□□ 0.58
GCFC2P16383 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.69■□□□□ 0.58
GCFC2P16383 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.69■□□□□ 0.58
GCFC2P16383 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.69■□□□□ 0.58
GCFC2P16383 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.69■□□□□ 0.58
GCFC2P16383 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.69■□□□□ 0.58
GCFC2P16383 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.69■□□□□ 0.58
GCFC2P16383 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCFC2P16383 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.69■□□□□ 0.58
GCFC2P16383 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.69■□□□□ 0.58
GCFC2P16383 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.69■□□□□ 0.58
GCFC2P16383 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.69■□□□□ 0.58
GCFC2P16383 ALOX12P2-203ENST00000570921 1945 ntBASIC18.68■□□□□ 0.58
GCFC2P16383 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.68■□□□□ 0.58
GCFC2P16383 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GCFC2P16383 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 SPCS2P4-201ENST00000436160 681 ntBASIC18.68■□□□□ 0.58
GCFC2P16383 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.68■□□□□ 0.58
GCFC2P16383 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.68■□□□□ 0.58
GCFC2P16383 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 AC105233.2-201ENST00000523697 349 ntBASIC18.68■□□□□ 0.58
GCFC2P16383 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GCFC2P16383 AF228730.5-201ENST00000530288 346 ntBASIC18.68■□□□□ 0.58
GCFC2P16383 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.68■□□□□ 0.58
GCFC2P16383 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GCFC2P16383 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
GCFC2P16383 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCFC2P16383 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms