Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 MINOS1P3-201ENST00000457048 203 ntBASIC16.1■□□□□ 0.17
LINGO3P0C6S8 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 AC009533.2-201ENST00000543664 586 ntBASIC16.1■□□□□ 0.17
LINGO3P0C6S8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.1■□□□□ 0.17
LINGO3P0C6S8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 BNIP3P18-201ENST00000593976 575 ntBASIC16.09■□□□□ 0.17
LINGO3P0C6S8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.09■□□□□ 0.17
LINGO3P0C6S8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 AC005840.4-201ENST00000541242 2494 ntBASIC16.08■□□□□ 0.17
LINGO3P0C6S8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINGO3P0C6S8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 AC002558.1-201ENST00000488906 803 ntBASIC16.08■□□□□ 0.16
LINGO3P0C6S8 IGHV3-52-201ENST00000519770 353 ntBASIC16.08■□□□□ 0.16
LINGO3P0C6S8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINGO3P0C6S8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms