Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.55■□□□□ 0.56
HOXC6P09630 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXC6P09630 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HOXC6P09630 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXC6P09630 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXC6P09630 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
HOXC6P09630 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXC6P09630 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXC6P09630 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.55■□□□□ 0.56
HOXC6P09630 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 RN7SL837P-201ENST00000463010 287 ntBASIC18.55■□□□□ 0.56
HOXC6P09630 RAB43P1-201ENST00000561790 589 ntBASIC18.55■□□□□ 0.56
HOXC6P09630 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
HOXC6P09630 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
HOXC6P09630 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXC6P09630 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXC6P09630 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HOXC6P09630 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HOXC6P09630 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC6P09630 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HOXC6P09630 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC6P09630 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC6P09630 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC6P09630 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC6P09630 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC6P09630 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC6P09630 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HOXC6P09630 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.54■□□□□ 0.56
HOXC6P09630 AC020765.3-201ENST00000613051 740 ntBASIC18.54■□□□□ 0.56
HOXC6P09630 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC6P09630 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC6P09630 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.53■□□□□ 0.56
HOXC6P09630 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.53■□□□□ 0.56
HOXC6P09630 AC022210.1-201ENST00000449856 793 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.53■□□□□ 0.56
HOXC6P09630 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.53■□□□□ 0.56
HOXC6P09630 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.53■□□□□ 0.56
HOXC6P09630 TPRX2P-201ENST00000535362 881 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 AC023310.3-201ENST00000557027 670 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 AC100756.1-201ENST00000562736 682 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 AC138749.3-201ENST00000567691 622 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.53■□□□□ 0.56
HOXC6P09630 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HOXC6P09630 LETM1P2-201ENST00000597330 2178 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.53■□□□□ 0.56
HOXC6P09630 AC116165.1-201ENST00000611806 668 ntBASIC18.53■□□□□ 0.56
HOXC6P09630 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms