Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.18■□□□□ 0.34
CD48P09326 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD48P09326 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CD48P09326 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.17■□□□□ 0.34
CD48P09326 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.17■□□□□ 0.34
CD48P09326 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.17■□□□□ 0.34
CD48P09326 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.17■□□□□ 0.34
CD48P09326 AL590627.1-203ENST00000421194 1026 ntBASIC17.17■□□□□ 0.34
CD48P09326 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.17■□□□□ 0.34
CD48P09326 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.17■□□□□ 0.34
CD48P09326 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.17■□□□□ 0.34
CD48P09326 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CD48P09326 AC132872.4-202ENST00000622924 2756 ntBASIC17.17■□□□□ 0.34
CD48P09326 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CD48P09326 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CD48P09326 AC006449.6-201ENST00000612330 2296 ntBASIC17.17■□□□□ 0.34
CD48P09326 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD48P09326 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
CD48P09326 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.17■□□□□ 0.34
CD48P09326 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.17■□□□□ 0.34
CD48P09326 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD48P09326 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD48P09326 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.16■□□□□ 0.34
CD48P09326 AC025580.3-201ENST00000617932 1424 ntBASIC17.16■□□□□ 0.34
CD48P09326 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.16■□□□□ 0.34
CD48P09326 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.16■□□□□ 0.34
CD48P09326 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.16■□□□□ 0.34
CD48P09326 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CD48P09326 AC004877.2-201ENST00000623941 599 ntBASIC17.16■□□□□ 0.34
CD48P09326 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.16■□□□□ 0.34
CD48P09326 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD48P09326 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CD48P09326 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.15■□□□□ 0.34
CD48P09326 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.15■□□□□ 0.34
CD48P09326 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.15■□□□□ 0.34
CD48P09326 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.15■□□□□ 0.34
CD48P09326 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.15■□□□□ 0.34
CD48P09326 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 AC023141.13-201ENST00000604991 943 ntBASIC17.15■□□□□ 0.34
CD48P09326 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 BCAR1-209ENST00000546196 1340 ntBASIC17.15■□□□□ 0.34
CD48P09326 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD48P09326 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.15■□□□□ 0.34
CD48P09326 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CD48P09326 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms