Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPRAP08240 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.67■□□□□ 0.26
SRPRAP08240 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPRAP08240 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPRAP08240 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPRAP08240 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.67■□□□□ 0.26
SRPRAP08240 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRPRAP08240 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SRPRAP08240 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SRPRAP08240 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.66■□□□□ 0.26
SRPRAP08240 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.66■□□□□ 0.26
SRPRAP08240 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.66■□□□□ 0.26
SRPRAP08240 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.66■□□□□ 0.26
SRPRAP08240 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.66■□□□□ 0.26
SRPRAP08240 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.66■□□□□ 0.26
SRPRAP08240 IGHV3-42-201ENST00000520410 361 ntBASIC16.66■□□□□ 0.26
SRPRAP08240 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 AC024267.1-201ENST00000582320 895 ntBASIC16.66■□□□□ 0.26
SRPRAP08240 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.66■□□□□ 0.26
SRPRAP08240 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
SRPRAP08240 AJ011932.1-201ENST00000621707 465 ntBASIC16.66■□□□□ 0.26
SRPRAP08240 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SRPRAP08240 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SRPRAP08240 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRPRAP08240 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SRPRAP08240 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SRPRAP08240 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.65■□□□□ 0.26
SRPRAP08240 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.65■□□□□ 0.26
SRPRAP08240 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.65■□□□□ 0.26
SRPRAP08240 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.65■□□□□ 0.26
SRPRAP08240 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.65■□□□□ 0.26
SRPRAP08240 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.65■□□□□ 0.26
SRPRAP08240 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.65■□□□□ 0.26
SRPRAP08240 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.65■□□□□ 0.26
SRPRAP08240 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.65■□□□□ 0.26
SRPRAP08240 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SRPRAP08240 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 PCGF3-213ENST00000620529 1899 ntBASIC16.65■□□□□ 0.26
SRPRAP08240 AL589702.1-201ENST00000641229 1509 ntBASIC16.65■□□□□ 0.26
SRPRAP08240 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SRPRAP08240 LINC01144-201ENST00000626198 1710 ntBASIC16.65■□□□□ 0.26
SRPRAP08240 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SRPRAP08240 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.64■□□□□ 0.25
SRPRAP08240 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 INGX-202ENST00000489074 768 ntBASIC16.64■□□□□ 0.25
SRPRAP08240 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.64■□□□□ 0.25
SRPRAP08240 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRPRAP08240 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms