Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
HMGN1P05114 AP005117.1-201ENST00000584346 1413 ntBASIC15.08■□□□□ 0
HMGN1P05114 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HMGN1P05114 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
HMGN1P05114 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.07■□□□□ 0
HMGN1P05114 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.07■□□□□ 0
HMGN1P05114 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
HMGN1P05114 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.07■□□□□ 0
HMGN1P05114 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.07■□□□□ 0
HMGN1P05114 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.07■□□□□ 0
HMGN1P05114 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.07■□□□□ 0
HMGN1P05114 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.07■□□□□ 0
HMGN1P05114 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.07■□□□□ 0
HMGN1P05114 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGN1P05114 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGN1P05114 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.06■□□□□ 0
HMGN1P05114 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
HMGN1P05114 PCED1CP-201ENST00000419887 785 ntBASIC15.06■□□□□ 0
HMGN1P05114 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
HMGN1P05114 PAWRP1-201ENST00000451083 565 ntBASIC15.06■□□□□ 0
HMGN1P05114 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.06■□□□□ 0
HMGN1P05114 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.06■□□□□ 0
HMGN1P05114 AC091167.2-201ENST00000579581 588 ntBASIC15.06■□□□□ 0
HMGN1P05114 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 AC099336.1-202ENST00000602961 463 ntBASIC15.06■□□□□ 0
HMGN1P05114 AC064862.7-201ENST00000604520 867 ntBASIC15.06■□□□□ 0
HMGN1P05114 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGN1P05114 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 LINC00554-201ENST00000564841 3011 ntBASIC15.06■□□□□ 0
HMGN1P05114 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
HMGN1P05114 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.06■□□□□ 0
HMGN1P05114 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.06■□□□□ 0
HMGN1P05114 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGN1P05114 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.05■□□□□ 0
HMGN1P05114 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGN1P05114 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGN1P05114 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
HMGN1P05114 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGN1P05114 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.05■□□□□ 0
HMGN1P05114 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
HMGN1P05114 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms