Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FAM210CP-201ENST00000445714 574 ntBASIC15.7■□□□□ 0.1
MT-ND1P03886 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.7■□□□□ 0.1
MT-ND1P03886 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.7■□□□□ 0.1
MT-ND1P03886 TPSP2-201ENST00000561760 610 ntBASIC15.7■□□□□ 0.1
MT-ND1P03886 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.7■□□□□ 0.1
MT-ND1P03886 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MT-ND1P03886 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.7■□□□□ 0.1
MT-ND1P03886 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 AC006449.6-201ENST00000612330 2296 ntBASIC15.7■□□□□ 0.1
MT-ND1P03886 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MT-ND1P03886 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.7■□□□□ 0.1
MT-ND1P03886 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
MT-ND1P03886 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.69■□□□□ 0.1
MT-ND1P03886 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND1P03886 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND1P03886 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.69■□□□□ 0.1
MT-ND1P03886 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND1P03886 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND1P03886 AP002383.4-201ENST00000442518 975 ntBASIC15.69■□□□□ 0.1
MT-ND1P03886 KRT17P6-201ENST00000453795 1220 ntBASIC15.69■□□□□ 0.1
MT-ND1P03886 MINOS1P3-201ENST00000457048 203 ntBASIC15.69■□□□□ 0.1
MT-ND1P03886 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.69■□□□□ 0.1
MT-ND1P03886 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.69■□□□□ 0.1
MT-ND1P03886 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.69■□□□□ 0.1
MT-ND1P03886 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.69■□□□□ 0.1
MT-ND1P03886 AC087388.1-201ENST00000571370 1112 ntBASIC15.69■□□□□ 0.1
MT-ND1P03886 IER3-202ENST00000376377 1350 ntBASIC15.69■□□□□ 0.1
MT-ND1P03886 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND1P03886 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND1P03886 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND1P03886 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MT-ND1P03886 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MT-ND1P03886 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MT-ND1P03886 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 INTS4P1-201ENST00000438455 1935 ntBASIC15.68■□□□□ 0.1
MT-ND1P03886 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-ND1P03886 TOB2P1-201ENST00000469761 992 ntBASIC15.68■□□□□ 0.1
MT-ND1P03886 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MT-ND1P03886 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
MT-ND1P03886 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.68■□□□□ 0.1
MT-ND1P03886 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.68■□□□□ 0.1
MT-ND1P03886 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.68■□□□□ 0.1
MT-ND1P03886 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
MT-ND1P03886 AP002414.4-201ENST00000589764 1148 ntBASIC15.68■□□□□ 0.1
MT-ND1P03886 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms