Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 Z97205.2-201ENST00000564697 1639 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.66■□□□□ 0.42
TIMP1P01033 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 BCRP2-202ENST00000447763 634 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 PFN1P12-201ENST00000455938 534 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 AC099548.2-209ENST00000480264 625 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 BCRP6-201ENST00000510112 632 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 BCRP7-201ENST00000511549 544 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.66■□□□□ 0.42
TIMP1P01033 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.66■□□□□ 0.42
TIMP1P01033 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TIMP1P01033 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 PCDHB17P-201ENST00000539533 2393 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 GPAA1P2-202ENST00000606848 1787 ntBASIC17.66■□□□□ 0.42
TIMP1P01033 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TIMP1P01033 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMP1P01033 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TIMP1P01033 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.65■□□□□ 0.42
TIMP1P01033 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
TIMP1P01033 AC135050.7-201ENST00000624508 2218 ntBASIC17.65■□□□□ 0.42
TIMP1P01033 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 CYP4F24P-201ENST00000586049 1580 ntBASIC17.65■□□□□ 0.42
TIMP1P01033 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TIMP1P01033 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TIMP1P01033 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TIMP1P01033 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TIMP1P01033 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TIMP1P01033 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.64■□□□□ 0.41
TIMP1P01033 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TIMP1P01033 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.64■□□□□ 0.41
TIMP1P01033 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.64■□□□□ 0.41
TIMP1P01033 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 AC005229.1-201ENST00000392885 409 ntBASIC17.64■□□□□ 0.41
TIMP1P01033 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.64■□□□□ 0.41
TIMP1P01033 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.64■□□□□ 0.41
TIMP1P01033 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.64■□□□□ 0.41
TIMP1P01033 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TIMP1P01033 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.64■□□□□ 0.41
TIMP1P01033 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.64■□□□□ 0.41
TIMP1P01033 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.64■□□□□ 0.41
TIMP1P01033 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.64■□□□□ 0.41
TIMP1P01033 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 AL391256.1-201ENST00000443260 1855 ntBASIC17.64■□□□□ 0.41
TIMP1P01033 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.64■□□□□ 0.41
TIMP1P01033 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TIMP1P01033 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms