Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CNOT4O95628 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.75□□□□□ -0.05
CNOT4O95628 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.75□□□□□ -0.05
CNOT4O95628 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CNOT4O95628 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CNOT4O95628 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.75□□□□□ -0.05
CNOT4O95628 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 MIR770-201ENST00000390219 98 ntBASIC14.75□□□□□ -0.05
CNOT4O95628 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.75□□□□□ -0.05
CNOT4O95628 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.75□□□□□ -0.05
CNOT4O95628 AP000344.2-201ENST00000512987 629 ntBASIC14.75□□□□□ -0.05
CNOT4O95628 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.75□□□□□ -0.05
CNOT4O95628 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.75□□□□□ -0.05
CNOT4O95628 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.75□□□□□ -0.05
CNOT4O95628 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.75□□□□□ -0.05
CNOT4O95628 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.75□□□□□ -0.05
CNOT4O95628 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.75□□□□□ -0.05
CNOT4O95628 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.75□□□□□ -0.05
CNOT4O95628 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.75□□□□□ -0.05
CNOT4O95628 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CNOT4O95628 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CNOT4O95628 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CNOT4O95628 AC092919.2-201ENST00000623631 1645 ntBASIC14.74□□□□□ -0.05
CNOT4O95628 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.74□□□□□ -0.05
CNOT4O95628 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.74□□□□□ -0.05
CNOT4O95628 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 RARRES2P8-201ENST00000566335 367 ntBASIC14.74□□□□□ -0.05
CNOT4O95628 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.74□□□□□ -0.05
CNOT4O95628 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CNOT4O95628 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CNOT4O95628 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CNOT4O95628 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CNOT4O95628 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
CNOT4O95628 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CNOT4O95628 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
CNOT4O95628 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms