Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.84□□□□□ -0.03
CDRT1O95170 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.84□□□□□ -0.03
CDRT1O95170 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC124864.1-201ENST00000623408 392 ntBASIC14.84□□□□□ -0.03
CDRT1O95170 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDRT1O95170 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 AC002310.6-201ENST00000624451 1377 ntBASIC14.84□□□□□ -0.03
CDRT1O95170 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CDRT1O95170 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDRT1O95170 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT1O95170 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT1O95170 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT1O95170 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.83□□□□□ -0.03
CDRT1O95170 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT1O95170 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT1O95170 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
CDRT1O95170 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.83□□□□□ -0.03
CDRT1O95170 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CDRT1O95170 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.83□□□□□ -0.03
CDRT1O95170 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDRT1O95170 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CDRT1O95170 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDRT1O95170 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDRT1O95170 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 AC009336.1-201ENST00000608941 1553 ntBASIC14.83□□□□□ -0.04
CDRT1O95170 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDRT1O95170 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDRT1O95170 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
CDRT1O95170 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 AC104076.2-201ENST00000448912 469 ntBASIC14.83□□□□□ -0.04
CDRT1O95170 STK19B-204ENST00000512515 211 ntBASIC14.83□□□□□ -0.04
CDRT1O95170 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.83□□□□□ -0.04
CDRT1O95170 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.83□□□□□ -0.04
CDRT1O95170 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.83□□□□□ -0.04
CDRT1O95170 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.83□□□□□ -0.04
CDRT1O95170 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.83□□□□□ -0.04
CDRT1O95170 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.83□□□□□ -0.04
CDRT1O95170 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDRT1O95170 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 AC125634.1-201ENST00000438758 1403 ntBASIC14.83□□□□□ -0.04
CDRT1O95170 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDRT1O95170 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDRT1O95170 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms