Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDHGA12O60330 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDHGA12O60330 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 GK-202ENST00000378941 458 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.43■□□□□ 0.22
PCDHGA12O60330 AL358472.5-202ENST00000641448 1267 ntBASIC16.43■□□□□ 0.22
PCDHGA12O60330 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 OR6D1P-203ENST00000641209 4860 ntBASIC16.43■□□□□ 0.22
PCDHGA12O60330 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA12O60330 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA12O60330 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 TOP3BP1-201ENST00000420768 1380 ntBASIC16.42■□□□□ 0.22
PCDHGA12O60330 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 AC092580.3-201ENST00000430932 139 ntBASIC16.42■□□□□ 0.22
PCDHGA12O60330 AC241585.1-201ENST00000433527 519 ntBASIC16.42■□□□□ 0.22
PCDHGA12O60330 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 AC027307.3-201ENST00000594262 1100 ntBASIC16.42■□□□□ 0.22
PCDHGA12O60330 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.42■□□□□ 0.22
PCDHGA12O60330 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA12O60330 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA12O60330 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 AC106886.4-201ENST00000623557 2502 ntBASIC16.41■□□□□ 0.22
PCDHGA12O60330 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.41■□□□□ 0.22
PCDHGA12O60330 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA12O60330 CRB3P1-201ENST00000449338 276 ntBASIC16.41■□□□□ 0.22
PCDHGA12O60330 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.41■□□□□ 0.22
PCDHGA12O60330 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms