Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.68■□□□□ 0.42
O00370 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.68■□□□□ 0.42
O00370 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
O00370 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.68■□□□□ 0.42
O00370 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.68■□□□□ 0.42
O00370 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
O00370 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
O00370 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
O00370 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
O00370 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
O00370 AC026691.1-201ENST00000602502 2017 ntBASIC17.67■□□□□ 0.42
O00370 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
O00370 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.67■□□□□ 0.42
O00370 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
O00370 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
O00370 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
O00370 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.67■□□□□ 0.42
O00370 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
O00370 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
O00370 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.67■□□□□ 0.42
O00370 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
O00370 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
O00370 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
O00370 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.67■□□□□ 0.42
O00370 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
O00370 AL513477.1-201ENST00000602865 2407 ntBASIC17.67■□□□□ 0.42
O00370 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
O00370 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
O00370 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
O00370 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
O00370 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
O00370 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.66■□□□□ 0.42
O00370 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.66■□□□□ 0.42
O00370 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
O00370 AC021097.1-201ENST00000607902 574 ntBASIC17.66■□□□□ 0.42
O00370 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.66■□□□□ 0.42
O00370 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.66■□□□□ 0.42
O00370 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 GGT3P-204ENST00000453783 1664 ntBASIC17.66■□□□□ 0.42
O00370 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.66■□□□□ 0.42
O00370 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
O00370 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
O00370 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
O00370 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.66■□□□□ 0.42
O00370 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
O00370 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
O00370 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
O00370 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
O00370 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
O00370 AC092474.2-201ENST00000424288 719 ntBASIC17.65■□□□□ 0.42
O00370 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
O00370 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.65■□□□□ 0.42
O00370 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.65■□□□□ 0.42
O00370 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms