Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
VGLL3A8MV65 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.29■□□□□ 0.2
VGLL3A8MV65 PHGDH-210ENST00000641115 1638 ntBASIC16.29■□□□□ 0.2
VGLL3A8MV65 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC16.29■□□□□ 0.2
VGLL3A8MV65 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 AC092368.3-202ENST00000574180 1591 ntBASIC16.29■□□□□ 0.2
VGLL3A8MV65 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VGLL3A8MV65 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 PHGDH-209ENST00000641074 1780 ntBASIC16.28■□□□□ 0.2
VGLL3A8MV65 MYO15B-237ENST00000642007 4893 ntBASIC16.28■□□□□ 0.2
VGLL3A8MV65 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 AC026366.1-201ENST00000488803 879 ntBASIC16.28■□□□□ 0.2
VGLL3A8MV65 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 PCDHB17P-202ENST00000623466 3066 ntBASIC16.28■□□□□ 0.2
VGLL3A8MV65 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VGLL3A8MV65 KRT8P17-201ENST00000453110 1448 ntBASIC16.28■□□□□ 0.2
VGLL3A8MV65 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.28■□□□□ 0.2
VGLL3A8MV65 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 ESRRAP1-201ENST00000400596 1257 ntBASIC16.27■□□□□ 0.2
VGLL3A8MV65 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 AP003097.1-201ENST00000530657 1135 ntBASIC16.27■□□□□ 0.2
VGLL3A8MV65 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VGLL3A8MV65 ITM2C-210ENST00000620962 501 ntBASIC16.27■□□□□ 0.2
VGLL3A8MV65 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.27■□□□□ 0.2
VGLL3A8MV65 TMEM191A-211ENST00000637163 1067 ntBASIC16.27■□□□□ 0.2
VGLL3A8MV65 AC104417.2-201ENST00000562989 1793 ntBASIC16.27■□□□□ 0.2
VGLL3A8MV65 AOC4P-203ENST00000566825 2289 ntBASIC16.27■□□□□ 0.2
VGLL3A8MV65 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VGLL3A8MV65 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VGLL3A8MV65 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
VGLL3A8MV65 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VGLL3A8MV65 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VGLL3A8MV65 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
VGLL3A8MV65 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VGLL3A8MV65 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.27■□□□□ 0.19
VGLL3A8MV65 AC136621.1-201ENST00000624017 2304 ntBASIC16.27■□□□□ 0.19
VGLL3A8MV65 AC140479.7-201ENST00000636301 2332 ntBASIC16.27■□□□□ 0.19
VGLL3A8MV65 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
VGLL3A8MV65 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VGLL3A8MV65 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VGLL3A8MV65 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VGLL3A8MV65 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VGLL3A8MV65 SSR4P1-203ENST00000599569 2260 ntBASIC16.26■□□□□ 0.19
VGLL3A8MV65 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VGLL3A8MV65 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VGLL3A8MV65 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms