Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 AL353135.1-201ENST00000606729 504 ntBASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 AP002414.2-201ENST00000591780 3365 ntBASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 AC138035.3-201ENST00000622706 2791 ntBASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 AP005901.3-202ENST00000581653 237 ntBASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TCRBV3S1A0A5B6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 AL592424.1-201ENST00000563624 1536 ntBASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TCRBV3S1A0A5B6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 AL645929.1-201ENST00000420084 975 ntBASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRBV3S1A0A5B6 AC073592.4-201ENST00000623827 446 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms