Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 LAGE3P1-201ENST00000425356 484 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 SCARNA2-201ENST00000458748 420 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 MIR3652-201ENST00000579335 131 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AC005412.3-201ENST00000580309 715 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AL445228.2-201ENST00000605589 952 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 REXO1L6P-202ENST00000619970 1078 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 AC104640.1-201ENST00000562617 2109 ntBASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TCRBV9S1A1TA0A576 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TSPY19P-201ENST00000418461 509 ntBASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TSPY18P-201ENST00000441642 509 ntBASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 AC021087.4-201ENST00000563761 564 ntBASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 AC006557.2-201ENST00000592985 1240 ntBASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 AP001350.2-201ENST00000625104 1094 ntBASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV9S1A1TA0A576 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms