Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC069224.1-201ENST00000566372 1715 ntBASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
LINC01558Q9Y6Z2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MCRIP2P1-201ENST00000394346 511 ntBASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 AL160286.2-201ENST00000567150 934 ntBASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 AL163051.1-201ENST00000569214 1512 ntBASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LINC01558Q9Y6Z2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
LINC01558Q9Y6Z2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms