Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 AC092053.1-201ENST00000605787 1936 ntBASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 AC092171.3-201ENST00000610122 2651 ntBASIC16.02■□□□□ 0.15
PCDHGA6Q9Y5G7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC25A1P3-201ENST00000395415 828 ntBASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 AC011467.4-201ENST00000594891 528 ntBASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDHGA6Q9Y5G7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 PCDHB17P-201ENST00000539533 2393 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AL355306.1-201ENST00000415580 579 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM8A3P-201ENST00000427218 844 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AC107918.2-201ENST00000530817 355 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AC092364.2-202ENST00000597012 1073 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AC026120.1-201ENST00000611536 926 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AL391005.1-201ENST00000623953 2435 ntBASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGA6Q9Y5G7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms