Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 AP000974.1-201ENST00000623909 2387 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AC005332.8-201ENST00000622750 2735 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 YBX1P6-201ENST00000442962 1002 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AC133539.2-201ENST00000604757 467 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 AC091271.1-201ENST00000611877 1162 ntBASIC18.55■□□□□ 0.56
TRIM17Q9Y577 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM17Q9Y577 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RPL13AP20-201ENST00000459725 609 ntBASIC18.54■□□□□ 0.56
TRIM17Q9Y577 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AC020765.3-201ENST00000613051 740 ntBASIC18.54■□□□□ 0.56
TRIM17Q9Y577 AC009542.2-202ENST00000619004 1067 ntBASIC18.54■□□□□ 0.56
TRIM17Q9Y577 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 HTR7P1-202ENST00000624664 4411 ntBASIC18.54■□□□□ 0.56
TRIM17Q9Y577 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 FRMD8P1-201ENST00000440433 1524 ntBASIC18.54■□□□□ 0.56
TRIM17Q9Y577 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM17Q9Y577 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 RN7SL399P-201ENST00000471648 279 ntBASIC18.53■□□□□ 0.56
TRIM17Q9Y577 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM17Q9Y577 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms