Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
USP15Q9Y4E8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP15Q9Y4E8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 OR8S1-201ENST00000310194 1080 ntBASIC17.9■□□□□ 0.46
USP15Q9Y4E8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 IGHV3-62-201ENST00000520057 340 ntBASIC17.9■□□□□ 0.46
USP15Q9Y4E8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 AL158211.3-201ENST00000607385 239 ntBASIC17.9■□□□□ 0.46
USP15Q9Y4E8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
USP15Q9Y4E8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.89■□□□□ 0.46
USP15Q9Y4E8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.89■□□□□ 0.46
USP15Q9Y4E8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
USP15Q9Y4E8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP15Q9Y4E8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 SPDYE7P-202ENST00000420373 878 ntBASIC17.89■□□□□ 0.45
USP15Q9Y4E8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 SPDYE14P-201ENST00000442619 822 ntBASIC17.89■□□□□ 0.45
USP15Q9Y4E8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP15Q9Y4E8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms