Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AC107918.4-202ENST00000641623 219 ntBASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AC006504.4-201ENST00000592118 1568 ntBASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 KRT8P49-201ENST00000604166 1432 ntBASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
RHBDD3Q9Y3P4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 RPS2P1-201ENST00000434010 821 ntBASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 RNPS1P1-201ENST00000507437 918 ntBASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 AC005052.1-201ENST00000625181 2492 ntBASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RHBDD3Q9Y3P4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 PI4KAP1-204ENST00000612579 1703 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 AC024909.3-201ENST00000611513 2257 ntBASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RHBDD3Q9Y3P4 ELK2BP-201ENST00000415014 1224 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms