Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.5■■□□□ 1.19
NINLQ9Y2I6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 CRB3P1-201ENST00000449338 276 ntBASIC22.49■■□□□ 1.19
NINLQ9Y2I6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 AL079307.3-201ENST00000556114 283 ntBASIC22.49■■□□□ 1.19
NINLQ9Y2I6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 AC026979.3-201ENST00000607315 403 ntBASIC22.49■■□□□ 1.19
NINLQ9Y2I6 MIR6799-201ENST00000620297 69 ntBASIC22.49■■□□□ 1.19
NINLQ9Y2I6 AC087499.5-201ENST00000452760 1342 ntBASIC22.49■■□□□ 1.19
NINLQ9Y2I6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NINLQ9Y2I6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 AL365330.1-201ENST00000607459 531 ntBASIC22.48■■□□□ 1.19
NINLQ9Y2I6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NINLQ9Y2I6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 RPL37AP1-201ENST00000412502 279 ntBASIC22.47■■□□□ 1.19
NINLQ9Y2I6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 AL589739.1-201ENST00000607720 493 ntBASIC22.47■■□□□ 1.19
NINLQ9Y2I6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NINLQ9Y2I6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.46■■□□□ 1.19
NINLQ9Y2I6 SPDYE17-201ENST00000412399 783 ntBASIC22.46■■□□□ 1.19
NINLQ9Y2I6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.46■■□□□ 1.19
NINLQ9Y2I6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NINLQ9Y2I6 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms