Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 AC124947.2-201ENST00000547118 1133 ntBASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FNDC3AQ9Y2H6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 AC092919.2-201ENST00000623631 1645 ntBASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 UBALD1-205ENST00000590891 2641 ntBASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 PAWRP1-201ENST00000451083 565 ntBASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 AC022145.2-201ENST00000598203 171 ntBASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 AL096865.1-201ENST00000606796 927 ntBASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FNDC3AQ9Y2H6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 AC099398.1-201ENST00000567919 2776 ntBASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FNDC3AQ9Y2H6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms