Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC243562.1-201ENST00000560672 389 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AL138918.1-201ENST00000568306 659 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AL662844.4-201ENST00000606367 2838 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHA4Q9UN74 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHA4Q9UN74 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC005622.1-201ENST00000636801 1703 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC093724.1-201ENST00000448659 1027 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SPDYE11-202ENST00000450699 704 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SPDYE9P-201ENST00000570642 692 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SPDYE10P-202ENST00000612005 668 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SPDYE8P-202ENST00000612377 668 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC092364.2-201ENST00000596710 2692 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 AC079328.2-201ENST00000561241 3354 ntBASIC18.89■□□□□ 0.61
PCDHA4Q9UN74 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 AC006449.5-201ENST00000610658 2098 ntBASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 KRT18P13-201ENST00000400056 1290 ntBASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 PRYP6-201ENST00000514804 343 ntBASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 AC023511.2-201ENST00000618803 211 ntBASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 OR6D1P-203ENST00000641209 4860 ntBASIC18.88■□□□□ 0.61
PCDHA4Q9UN74 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms