Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 RRP7BP-205ENST00000566851 833 ntBASIC18.7■□□□□ 0.58
CPA4Q9UI42 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPA4Q9UI42 MIR6787-201ENST00000616675 61 ntBASIC18.7■□□□□ 0.58
CPA4Q9UI42 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CPA4Q9UI42 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 MIR1908-201ENST00000410394 80 ntBASIC18.69■□□□□ 0.58
CPA4Q9UI42 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 USP32P1-208ENST00000506594 1164 ntBASIC18.69■□□□□ 0.58
CPA4Q9UI42 AC104596.2-201ENST00000512793 793 ntBASIC18.69■□□□□ 0.58
CPA4Q9UI42 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 TIMM17BP1-201ENST00000545713 516 ntBASIC18.69■□□□□ 0.58
CPA4Q9UI42 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 RPSAP52-203ENST00000622976 1023 ntBASIC18.69■□□□□ 0.58
CPA4Q9UI42 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.69■□□□□ 0.58
CPA4Q9UI42 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 RNF165-205ENST00000588679 2904 ntBASIC18.69■□□□□ 0.58
CPA4Q9UI42 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPA4Q9UI42 KRT8P44-201ENST00000441609 1350 ntBASIC18.68■□□□□ 0.58
CPA4Q9UI42 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AC018665.1-201ENST00000622927 1362 ntBASIC18.68■□□□□ 0.58
CPA4Q9UI42 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 KRT43P-201ENST00000434019 910 ntBASIC18.68■□□□□ 0.58
CPA4Q9UI42 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AL139010.1-201ENST00000454878 894 ntBASIC18.68■□□□□ 0.58
CPA4Q9UI42 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AL583810.1-201ENST00000553344 1045 ntBASIC18.68■□□□□ 0.58
CPA4Q9UI42 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AC074044.1-201ENST00000609673 707 ntBASIC18.68■□□□□ 0.58
CPA4Q9UI42 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.68■□□□□ 0.58
CPA4Q9UI42 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms