Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 LINC02199-201ENST00000506655 2702 ntBASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 AC002347.1-201ENST00000569543 541 ntBASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 AL513190.1-201ENST00000621254 727 ntBASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 AC092865.6-201ENST00000642101 219 ntBASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PPARGC1AQ9UBK2 AL603756.1-201ENST00000606511 2163 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 AC004832.2-201ENST00000426397 482 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 AC074386.1-202ENST00000463561 864 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 NFIC-211ENST00000641145 8399 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 AC011270.2-201ENST00000624293 2550 ntBASIC17.3■□□□□ 0.36
PPARGC1AQ9UBK2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 AC023274.1-201ENST00000418278 595 ntBASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 MCCD1P2-201ENST00000423228 335 ntBASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 MIR3909-201ENST00000579518 119 ntBASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PPARGC1AQ9UBK2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms