Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 KRT18P27-201ENST00000427733 1299 ntBASIC15.5■□□□□ 0.07
RLIMQ9NVW2 HNRNPDP1-201ENST00000439535 754 ntBASIC15.5■□□□□ 0.07
RLIMQ9NVW2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 DUSP5P1-201ENST00000441325 1139 ntBASIC15.5■□□□□ 0.07
RLIMQ9NVW2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 OR7E14P-202ENST00000530490 1290 ntBASIC15.5■□□□□ 0.07
RLIMQ9NVW2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 AL805961.1-202ENST00000641562 540 ntBASIC15.5■□□□□ 0.07
RLIMQ9NVW2 AF228730.7-201ENST00000641842 219 ntBASIC15.5■□□□□ 0.07
RLIMQ9NVW2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.5■□□□□ 0.07
RLIMQ9NVW2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AC073621.1-201ENST00000392730 636 ntBASIC15.49■□□□□ 0.07
RLIMQ9NVW2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 RPS15P9-201ENST00000494093 319 ntBASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AC073648.2-201ENST00000510116 352 ntBASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 MPDU1-223ENST00000582151 728 ntBASIC15.49■□□□□ 0.07
RLIMQ9NVW2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 AL596087.1-201ENST00000400979 1969 ntBASIC15.49■□□□□ 0.07
RLIMQ9NVW2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SNX33P1-201ENST00000592116 1762 ntBASIC15.49■□□□□ 0.07
RLIMQ9NVW2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RLIMQ9NVW2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 FAM197Y8-203ENST00000450145 560 ntBASIC15.48■□□□□ 0.07
RLIMQ9NVW2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.48■□□□□ 0.07
RLIMQ9NVW2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms