Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.14■□□□□ 0.82
ECHDC1Q9NTX5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
ECHDC1Q9NTX5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
ECHDC1Q9NTX5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AC093724.1-201ENST00000448659 1027 ntBASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 KRT8P48-201ENST00000515599 1220 ntBASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AL138918.1-201ENST00000568306 659 ntBASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
ECHDC1Q9NTX5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 AC005622.1-201ENST00000636801 1703 ntBASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 RN7SL589P-201ENST00000481268 310 ntBASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 OR6D1P-203ENST00000641209 4860 ntBASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
ECHDC1Q9NTX5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.12■□□□□ 0.81
ECHDC1Q9NTX5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms