Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AC132008.2-207ENST00000454517 770 ntBASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AC091167.2-201ENST00000579581 588 ntBASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AP001269.4-201ENST00000609611 512 ntBASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 AF228730.7-201ENST00000641842 219 ntBASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.46□□□□□ -0.57
CDC42SE2Q9NRR3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 GPAA1P2-202ENST00000606848 1787 ntBASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 LINC00554-201ENST00000564841 3011 ntBASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
CDC42SE2Q9NRR3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 AC106795.1-205ENST00000512851 1056 ntBASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 NKAPP1-205ENST00000585790 367 ntBASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 REXO1L3P-201ENST00000622202 1288 ntBASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 AL139288.1-201ENST00000623748 933 ntBASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.45□□□□□ -0.58
CDC42SE2Q9NRR3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms