Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC104640.1-201ENST00000562617 2109 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC098831.1-202ENST00000438821 336 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC092910.1-201ENST00000482027 1129 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC079776.4-201ENST00000511039 504 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AL049840.3-201ENST00000602669 611 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 AC243591.1-201ENST00000452967 1364 ntBASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLK4Q9HAZ1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLK4Q9HAZ1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 LINC02012-201ENST00000608206 1725 ntBASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 AL590627.1-203ENST00000421194 1026 ntBASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 AC117500.6-201ENST00000624871 588 ntBASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLK4Q9HAZ1 IL9RP2-201ENST00000423948 1312 ntBASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLK4Q9HAZ1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms