Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
POLR1EQ9GZS1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 ACTG1P14-201ENST00000446382 1122 ntBASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 RARRES2P8-201ENST00000566335 367 ntBASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
POLR1EQ9GZS1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 AL355306.1-201ENST00000415580 579 ntBASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 AC092902.6-201ENST00000641783 218 ntBASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
POLR1EQ9GZS1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.77■□□□□ 0.28
POLR1EQ9GZS1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms