Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 PTPN20-225ENST00000511769 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
KRTAP3-3Q9BYR6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 MAP3K7CL-216ENST00000545939 1407 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 GLYATL3-201ENST00000371197 1113 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AL355615.1-201ENST00000406187 641 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 RNU2-66P-201ENST00000410650 161 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 NPM1P11-201ENST00000417106 855 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 SGO1-207ENST00000425061 1213 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 MTCYBP6-201ENST00000441810 138 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC245517.1-201ENST00000444224 1262 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 MTCYBP42-201ENST00000444653 1130 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 RPL32P14-201ENST00000463196 378 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AL121769.1-201ENST00000469473 401 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 NDUFA5P2-201ENST00000519723 344 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AP003392.2-201ENST00000527269 208 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC087477.6-201ENST00000559595 843 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC123768.3-203ENST00000576873 969 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AP000919.1-201ENST00000582850 985 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 MTDHP2-201ENST00000601468 714 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC068726.1-201ENST00000610993 341 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 C6orf203-204ENST00000625458 1146 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC011591.2-201ENST00000636637 786 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 AC119674.1-207ENST00000641355 633 ntBASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 ANKRD55-202ENST00000434982 1518 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP3-3Q9BYR6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC01521-201ENST00000504184 1943 ntBASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP3-3Q9BYR6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms