Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 AC092865.5-201ENST00000545435 363 ntBASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 MIR4492-201ENST00000581627 80 ntBASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 AC008894.3-201ENST00000624324 3103 ntBASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 LINC02199-201ENST00000506655 2702 ntBASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 MIR940-201ENST00000401276 94 ntBASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 AC108073.2-201ENST00000464002 357 ntBASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 SLC25A1P1-201ENST00000528351 927 ntBASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 AL671883.3-201ENST00000603274 991 ntBASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 MIR7706-201ENST00000613747 67 ntBASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
YIPF4Q9BSR8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 ZNF259P1-201ENST00000407656 1365 ntBASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 HLA-J-202ENST00000469281 1241 ntBASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 RNA5SP419-201ENST00000515908 135 ntBASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
YIPF4Q9BSR8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms