Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 RPS8P6-201ENST00000426177 609 ntBASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AL513480.1-201ENST00000451731 511 ntBASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AC112482.1-201ENST00000492080 688 ntBASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 AC025580.3-201ENST00000617932 1424 ntBASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCGF1Q9BSM1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 AGGF1P2-201ENST00000426656 2106 ntBASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 AC092850.2-201ENST00000623821 2697 ntBASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 SLC25A6P2-201ENST00000497974 877 ntBASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 KRT19P2-202ENST00000557173 1012 ntBASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PCGF1Q9BSM1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 AC129492.6-201ENST00000611383 1305 ntBASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PCGF1Q9BSM1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms