Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC21.6■■□□□ 1.05
ABCA3Q99758 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.6■■□□□ 1.05
ABCA3Q99758 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 AC079316.1-201ENST00000548397 411 ntBASIC21.6■■□□□ 1.05
ABCA3Q99758 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ABCA3Q99758 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.6■■□□□ 1.05
ABCA3Q99758 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ABCA3Q99758 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
ABCA3Q99758 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.6■■□□□ 1.05
ABCA3Q99758 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.6■■□□□ 1.05
ABCA3Q99758 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ABCA3Q99758 ACTG1P17-201ENST00000558391 1119 ntBASIC21.6■■□□□ 1.05
ABCA3Q99758 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.6■■□□□ 1.05
ABCA3Q99758 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC21.6■■□□□ 1.05
ABCA3Q99758 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.6■■□□□ 1.05
ABCA3Q99758 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ABCA3Q99758 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.6■■□□□ 1.05
ABCA3Q99758 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ABCA3Q99758 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.59■■□□□ 1.05
ABCA3Q99758 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCA3Q99758 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.59■■□□□ 1.05
ABCA3Q99758 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
ABCA3Q99758 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCA3Q99758 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCA3Q99758 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
ABCA3Q99758 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.59■■□□□ 1.05
ABCA3Q99758 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC21.59■■□□□ 1.05
ABCA3Q99758 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.59■■□□□ 1.05
ABCA3Q99758 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ABCA3Q99758 PCGF3-213ENST00000620529 1899 ntBASIC21.59■■□□□ 1.05
ABCA3Q99758 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.59■■□□□ 1.05
ABCA3Q99758 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.59■■□□□ 1.05
ABCA3Q99758 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.58■■□□□ 1.05
ABCA3Q99758 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.58■■□□□ 1.05
ABCA3Q99758 TOMM22P5-201ENST00000416399 439 ntBASIC21.58■■□□□ 1.05
ABCA3Q99758 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.58■■□□□ 1.05
ABCA3Q99758 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.58■■□□□ 1.05
ABCA3Q99758 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.58■■□□□ 1.05
ABCA3Q99758 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.58■■□□□ 1.05
ABCA3Q99758 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.58■■□□□ 1.05
ABCA3Q99758 CLUHP6-201ENST00000580789 941 ntBASIC21.58■■□□□ 1.05
ABCA3Q99758 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ABCA3Q99758 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ABCA3Q99758 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.58■■□□□ 1.05
ABCA3Q99758 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ABCA3Q99758 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ABCA3Q99758 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ABCA3Q99758 KRT8P37-201ENST00000451609 1420 ntBASIC21.58■■□□□ 1.05
ABCA3Q99758 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC21.58■■□□□ 1.04
ABCA3Q99758 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ABCA3Q99758 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ABCA3Q99758 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ABCA3Q99758 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ABCA3Q99758 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCA3Q99758 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ABCA3Q99758 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.58■■□□□ 1.04
ABCA3Q99758 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCA3Q99758 AP002490.2-201ENST00000524791 560 ntBASIC21.58■■□□□ 1.04
ABCA3Q99758 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
ABCA3Q99758 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ABCA3Q99758 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.58■■□□□ 1.04
ABCA3Q99758 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCA3Q99758 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
ABCA3Q99758 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCA3Q99758 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCA3Q99758 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ABCA3Q99758 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCA3Q99758 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ABCA3Q99758 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.57■■□□□ 1.04
ABCA3Q99758 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCA3Q99758 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCA3Q99758 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCA3Q99758 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms