Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL12A1Q99715 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.26□□□□□ -0.13
COL12A1Q99715 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL12A1Q99715 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL12A1Q99715 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
COL12A1Q99715 RNA5SP410-201ENST00000516285 106 ntBASIC14.26□□□□□ -0.13
COL12A1Q99715 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 AC020914.3-201ENST00000594712 304 ntBASIC14.26□□□□□ -0.13
COL12A1Q99715 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL12A1Q99715 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL12A1Q99715 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL12A1Q99715 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL12A1Q99715 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL12A1Q99715 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.26□□□□□ -0.13
COL12A1Q99715 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL12A1Q99715 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.26□□□□□ -0.13
COL12A1Q99715 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.25□□□□□ -0.13
COL12A1Q99715 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL12A1Q99715 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL12A1Q99715 AC007613.1-201ENST00000572811 2597 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 AC092068.3-201ENST00000587894 2016 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.25□□□□□ -0.13
COL12A1Q99715 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.25□□□□□ -0.13
COL12A1Q99715 RPL13AP19-201ENST00000434320 584 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 AL591846.1-201ENST00000451736 433 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.25□□□□□ -0.13
COL12A1Q99715 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.25□□□□□ -0.13
COL12A1Q99715 AC021097.1-201ENST00000607902 574 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.25□□□□□ -0.13
COL12A1Q99715 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.25□□□□□ -0.13
COL12A1Q99715 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 AC079316.1-201ENST00000548397 411 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.25□□□□□ -0.13
COL12A1Q99715 AC133539.2-201ENST00000604757 467 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 MIR6756-201ENST00000616240 63 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 AP001505.2-201ENST00000616815 443 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 CU634019.7-201ENST00000624153 1185 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 FP236241.2-201ENST00000624906 1185 ntBASIC14.25□□□□□ -0.13
COL12A1Q99715 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.25□□□□□ -0.13
COL12A1Q99715 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL12A1Q99715 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
COL12A1Q99715 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.24□□□□□ -0.13
COL12A1Q99715 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 CNN2P8-201ENST00000421872 913 ntBASIC14.24□□□□□ -0.13
COL12A1Q99715 NKAIN1P1-201ENST00000435754 582 ntBASIC14.24□□□□□ -0.13
COL12A1Q99715 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.24□□□□□ -0.13
COL12A1Q99715 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.24□□□□□ -0.13
COL12A1Q99715 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.24□□□□□ -0.13
COL12A1Q99715 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COL12A1Q99715 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.24□□□□□ -0.13
COL12A1Q99715 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 AC004408.2-201ENST00000623613 2777 ntBASIC14.24□□□□□ -0.13
COL12A1Q99715 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COL12A1Q99715 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.24□□□□□ -0.13
COL12A1Q99715 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.24□□□□□ -0.13
COL12A1Q99715 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL12A1Q99715 Z93015.1-201ENST00000451718 390 ntBASIC14.24□□□□□ -0.13
COL12A1Q99715 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.24□□□□□ -0.13
COL12A1Q99715 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.24□□□□□ -0.13
COL12A1Q99715 MIR4492-201ENST00000581627 80 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms