Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 AC025678.2-201ENST00000562061 970 ntBASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 AP001059.3-201ENST00000619053 235 ntBASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMARCD1Q96GM5 LTB4R2-202ENST00000528054 3092 ntBASIC17.39■□□□□ 0.38
SMARCD1Q96GM5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 LINC01144-201ENST00000626198 1710 ntBASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 AC020916.1-201ENST00000587762 1774 ntBASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 AC093724.1-201ENST00000448659 1027 ntBASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SMARCD1Q96GM5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 FOXO1B-201ENST00000504678 1527 ntBASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 ALG1L8P-201ENST00000533887 760 ntBASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 AL512356.2-201ENST00000546955 174 ntBASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 AC026150.2-201ENST00000564693 1156 ntBASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SMARCD1Q96GM5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AC011676.5-201ENST00000624864 2660 ntBASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms