Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDCA5Q96FF9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.14■□□□□ 0.66
CDCA5Q96FF9 AL512652.2-201ENST00000625156 1716 ntBASIC19.14■□□□□ 0.66
CDCA5Q96FF9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.66
CDCA5Q96FF9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDCA5Q96FF9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AL162726.2-201ENST00000438986 1017 ntBASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AL022328.1-201ENST00000610050 478 ntBASIC19.14■□□□□ 0.65
CDCA5Q96FF9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDCA5Q96FF9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 ACTG1P3-201ENST00000431775 1114 ntBASIC19.13■□□□□ 0.65
CDCA5Q96FF9 TDH-203ENST00000531764 1110 ntBASIC19.13■□□□□ 0.65
CDCA5Q96FF9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 AL391069.4-201ENST00000609583 481 ntBASIC19.13■□□□□ 0.65
CDCA5Q96FF9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.13■□□□□ 0.65
CDCA5Q96FF9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 FO393414.2-201ENST00000405153 598 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 FAM21FP-201ENST00000426241 1131 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 BCRP2-202ENST00000447763 634 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 FO681548.1-201ENST00000455617 1132 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 BCRP6-201ENST00000510112 632 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 BCRP7-201ENST00000511549 544 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDCA5Q96FF9 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.12■□□□□ 0.65
CDCA5Q96FF9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.11■□□□□ 0.65
CDCA5Q96FF9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms