Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PTCHD3P3-201ENST00000403073 906 ntBASIC14.94□□□□□ -0.02
PTP4A1Q93096 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 DUSP5P1-201ENST00000441325 1139 ntBASIC14.94□□□□□ -0.02
PTP4A1Q93096 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 AC004706.3-202ENST00000621574 984 ntBASIC14.94□□□□□ -0.02
PTP4A1Q93096 AF228730.7-201ENST00000641842 219 ntBASIC14.94□□□□□ -0.02
PTP4A1Q93096 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTP4A1Q93096 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.94□□□□□ -0.02
PTP4A1Q93096 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 AC139887.3-201ENST00000568585 713 ntBASIC14.93□□□□□ -0.02
PTP4A1Q93096 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTP4A1Q93096 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.93□□□□□ -0.02
PTP4A1Q93096 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 AL450487.1-201ENST00000426799 995 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 PMS2P1-201ENST00000431037 1228 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTP4A1Q93096 UNC93B7-201ENST00000509439 705 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 AF238378.1-201ENST00000526806 358 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 KRT126P-201ENST00000549467 1181 ntBASIC14.92□□□□□ -0.02
PTP4A1Q93096 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PTP4A1Q93096 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms